Example Question | Logistic Outcome | Path Diagram | Quoted Names | Linear Outcome | How To Report | What Not To Claim
Package: gtregression 1.1.0
Rubeshkumar Polani
gtregression: Tools for Creating Publication-Ready Regression Tables
Simplifies regression modeling in R by integrating multiple modeling and summarization tools into a cohesive, user-friendly interface. Designed to be accessible for researchers, particularly those in Low- and Middle-Income Countries (LMIC). Built upon widely accepted statistical methods, including logistic regression (Hosmer et al. 2013, ISBN:9781118548429), log-binomial regression (Spiegelman and Hertzmark 2005 <doi:10.1093/aje/kwi188>), Firth penalized logistic regression (Firth 1993 <doi:10.1093/biomet/80.1.27>), Poisson and robust Poisson regression (Zou 2004 <doi:10.1093/aje/kwh090>), negative binomial regression (Hilbe 2011, ISBN:9780521179515), Cox proportional hazards regression, parametric survival regression, causal mediation analysis, and linear regression (Kutner et al. 2005, ISBN:9780071122214). Leverages multiple dependencies to ensure high-quality output and generate reproducible, publication-ready tables in alignment with best practices in epidemiology and applied statistics.
Authors:
gtregression_1.1.0.tar.gz
gtregression_1.1.0.zip(r-4.7-any)gtregression_1.1.0.zip(r-4.6-any)gtregression_1.1.0.zip(r-4.5-any)
gtregression_1.1.0.tgz(r-4.6-any)gtregression_1.1.0.tgz(r-4.5-any)
gtregression_1.1.0.tar.gz(r-4.7-any)gtregression_1.1.0.tar.gz(r-4.6-any)
gtregression_1.1.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
gtregression/json (API)
| # Install 'gtregression' in R: |
| install.packages('gtregression', repos = c('https://thinkdenominator.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/thinkdenominator/gtregression/issues
Pkgdown/docs site:https://gtregression.thinkdenominator.com
Datasets:
- data_birthwt - Birth Weight Data
- data_diabetes_mediation - Diabetes Mediation Teaching Dataset
- data_endometrial - Endometrial Cancer Histology Grade Data
- data_epilepsy - Epilepsy Treatment and Seizure Counts
- data_gt_quin - Student Absenteeism in Rural Schools
- data_infertility - Infertility Matched Case-Control Study
- data_lungcancer - Lung Cancer Trial Data
- data_SynthDiabetes - Synthetic Diabetes Dataset
Last updated from:cba5a5e461. Checks:1 ERROR, 8 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel | ERROR | 303 | ||
| source / vignettes | OK | 300 | ||
| linux-release | OK | 363 | ||
| macos-release | OK | 223 | ||
| macos-oldrel | OK | 219 | ||
| windows-devel | OK | 305 | ||
| windows-release | OK | 308 | ||
| windows-oldrel | OK | 295 | ||
| wasm-release | OK | 184 |
Exports:check_collinearitycheck_convergencecheck_phcompare_modelscox_regdescriptive_tabledissectforest_dfforest_reggtregression_appidentify_confounderinteraction_modelskm_plotkm_risk_tablelogrank_testmediation_analysismerge_tablesmodify_tablemulti_regplot_mediationplot_model_fitplot_regplot_reg_combineplot_surv_fitrmst_tablesave_docxsave_forestsave_plotsave_tableselect_modelsstratified_multi_regstratified_uni_regsurv_model_comparesurv_predictsurv_regsurvival_probsurvival_quantilessurvival_summaryuni_reg
Dependencies:askpassbackportsbase64encbcabootbigDbitbit64bitopsbootbroombroom.helpersbslibcachemcardsclicliprcodetoolscommonmarkcpp11crayoncurldata.tabledigestdplyrevaluatefarverfastmapflextablefontawesomefontBitstreamVerafontLiberationfontquiverforcatsforeachforestploterformula.toolsfsgdtoolsgenericsggplot2glmnetgluegridExtragtgtablehavenhighrhmshtmltoolshtmlwidgetsisobanditeratorsjomojquerylibjsonlitejuicyjuiceknitrlabelinglabelledlatticelifecyclelitedownlme4lmtestlogistfmagrittrmarkdownMASSMatrixmemoisemgcvmicemimeminqamitmlnlmenloptrnnetnumDerivofficeropenssloperator.toolsordinalpanpatchworkpillarpkgconfigprettyunitsprogresspurrrR6raggrappdirsrbibutilsRColorBrewerRcppRcppEigenRdpackreactablereactRreadrreformulasrisksrlangrmarkdownrpartS7sandwichsassscalesshapestringistringrsurvivalsyssystemfontstextshapingtibbletidyrtidyselecttinytextzdbucminfutf8uuidV8vctrsviridisLitevroomwithrxfunxml2yamlzipzoo
Causal Mediation Analysis
Last update: 2026-08-20
Started: 2026-07-29
Confounding and Interaction
Which Function Should I Use? | How the Interaction Tests Differ | Identify Confounders | Mantel-Haenszel Estimate | Test Interaction | Survival Confounding and Interaction | Causal Mediation | Overlap and Difference | What To Inspect
Last update: 2026-08-20
Started: 2026-07-22
Customize, Merge, and Export
Customize Labels | Customisation Options At A Glance | Merge Tables | Keep Binary Rows Consistent | Save Outputs | Word Reports | What To Inspect
Last update: 2026-08-20
Started: 2026-07-22
Descriptive Tables
Column Percentages | Row Percentages | Summary Choices | Output Format | What To Inspect
Last update: 2026-08-20
Started: 2026-07-22
Diagnostics and Model Selection
Convergence Screening | Collinearity Screening | Model Fit Plots | Proportional Hazards Screening | Stepwise Model Selection | Build Candidates in the App | What To Inspect
Last update: 2026-08-20
Started: 2026-07-22
Function Options
Function Options at a Glance | Common Choices | Describe and Inspect Data | descriptive_table() | dissect() | Regression Tables | uni_reg() | multi_reg() | stratified_uni_reg() | stratified_multi_reg() | Cox and Parametric Survival Regression | cox_reg() | surv_reg() | Kaplan-Meier and Survival Summaries | km_plot() | survival_summary() | survival_quantiles() | survival_prob() and km_risk_table() | logrank_test() | rmst_table() | Parametric survival helpers | Regression Plots and Model Fit | plot_reg() | plot_reg_combine() | plot_model_fit() | Forest Tables and Forest Plots | forest_df() | forest_reg() | save_forest() | Diagnostics, Selection, and Model Comparison | check_convergence() | check_collinearity() | select_models() | compare_models() | Compare Models in the gtregression App | Confounding, Interaction, and Mediation | identify_confounder() | interaction_models() | mediation_analysis() | plot_mediation() | Merge, Modify, and Export | merge_tables() | modify_table() | Save helpers | Practical Defaults
Last update: 2026-08-20
Started: 2026-08-07
Regression Tables
Univariable Models | Multivariable Models | Exposure-Specific Adjusted Models | Optional Model Statistics | Other Effect Measures | Cox Survival Models | Parametric Survival Models | Continuous Outcomes | What To Inspect
Last update: 2026-08-20
Started: 2026-07-22
Start Here: Model to Manuscript
gtregression | What You Can Make | What Powers the Package | Install | Prepare Example Data | Five-Minute Workflow | Describe | Model | Visualise | Merge and Polish | Where To Go Next
Last update: 2026-08-20
Started: 2025-05-25
Using the gtregression App
gtregression App Manual | Launch the App | Close the App Safely | App Dependencies | Recommended Workflow | Core and Additional Options | Quick-Start Templates | Workflow Guide | Live Analysis Status and Preflight Checks | Select and Clear Variable Buttons | Data Tab | Data Prep Tab | Descriptive Tab | Binary Variables | Numeric Statistic Overrides | Regression Tab | Reference Categories | Model Statistics | Stratified Regression | Survival Tab | Kaplan-Meier Plots | Visualise & Export Tab | Model Fit | Export Size Presets | Forest Plot Controls | Download Formats | Session Code | Merge Tables | Regression Plots | Modify Table | Forest Tables | Advanced Tab | Build and Compare Candidate Models | Birth Weight Example | Cox and Parametric Survival Examples | Reading the Comparison | Model Selection and Comparison | Role Checks | Confounding and Interaction | Mediation Tab | Saving Outputs | Troubleshooting | The App Does Not Open | The Browser Preview Looks Cramped | Forest Plot X-Axis Labels Overlap | Forest Plot Columns Feel Too Narrow | Kaplan-Meier Curves Look Almost Flat | Merged Tables Do Not Align as Expected | Chrome or Browser Crashes | Nothing Appears After Clicking a Button | Beginner Case Study: Birth Weight | Best Practice
Last update: 2026-08-20
Started: 2026-08-14
Visualise Regression Results
Kaplan-Meier Curve | Risk Table | Restricted Mean Survival Time | Kaplan-Meier Summary | Survival Quantiles | Survival Probabilities | Log-Rank Test | Parametric Survival Model Comparison | Parametric Survival Fit Plot | Parametric Survival Prediction | One Regression Plot | Adjusted Regression Plot | Compact Binary Predictors | Log Axis and Tick Marks | Compare Crude and Adjusted Effects | Publication-Style Forest Table | Fine-Tune Forest Tables | What To Inspect
Last update: 2026-08-20
Started: 2026-07-22
Stratified Analysis
Describe by Stratum | Univariable by Stratum | Full Multivariable Model by Stratum | Exposure-Specific Adjusted Models by Stratum | Forest Plot by Stratum | What To Inspect
Last update: 2026-08-07
Started: 2026-07-22
Survival Analysis
1. Describe The Cohort | 2. Show Observed Survival | 3. Compare Survival Curves | 4. Fit Cox Regression | 5. Fit Parametric Survival Regression | 6. Predict Survival Probabilities | 7. Visualise And Export Model Results | Survival Workflow Map
Last update: 2026-07-31
Started: 2026-07-27
