R-universe - saketlab (Saket Lab)

anumaan - Antimicrobial Resistance Surveillance Preprocessing and Burden Estimation

anumaan provides a preprocessing pipeline for antimicrobial resistance (AMR) surveillance data, exploratory data analysis (EDA) tools for reviewing cohorts prior to modelling, and burden estimation. Supports polymicrobial weighting, MDR/XDR classification, resistance profile estimation, and burden estimation calculations.

Last updated

4.81 score 1 stars 9 scripts

seqout - Client for Querying the 'SeqOut' Genomics Metadata Database

Search and download genomics study metadata from 'SeqOut' <https://seqout.org>, which indexes NCBI GEO, NCBI SRA, EBI ENA, DDBJ (DRA and GEA), ArrayExpress and GSA.

Last updated

4.20 score 4 stars 8 scripts

censusindia - Census of India data for R

Digitised Census of India data from 1901 to 2011: population time series, primary census abstracts at state and district levels, mother tongue tables, SC/ST and tribal populations, and administrative directories. Census variables can be retrieved with geographic boundaries attached for mapping.

Last updated

4.18 score 1 stars 7 scripts