Package: wcvpmatch 0.0.2

wcvpmatch: Taxonomic Name Reconciliation Against the 'WCVP' Backbone

Standardizes and reconciles scientific plant names against a World Checklist of Vascular Plants ('WCVP')-style taxonomic backbone. The package parses names into taxonomic components and applies staged exact and fuzzy matching for binomial and trinomial inputs, including infraspecific rank-aware checks. It also returns accepted-name context and row-level matching flags to support reproducible, auditable preprocessing for downstream biodiversity, spatial, and trait analyses. A user-supplied backbone can be passed through 'target_df'; when the optional companion package 'wcvpdata' is installed, its default checklist can also be used.

Authors:Paul Efren Santos Andrade [aut, cre, cph]

wcvpmatch_0.0.2.tar.gz
wcvpmatch_0.0.2.zip(r-4.7-any)wcvpmatch_0.0.2.zip(r-4.6-any)wcvpmatch_0.0.2.zip(r-4.5-any)
wcvpmatch_0.0.2.tgz(r-4.6-any)wcvpmatch_0.0.2.tgz(r-4.5-any)
wcvpmatch_0.0.2.tar.gz(r-4.7-any)wcvpmatch_0.0.2.tar.gz(r-4.6-any)
wcvpmatch_0.0.2.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
wcvpmatch/json (API)

# Install 'wcvpmatch' in R:
install.packages('wcvpmatch', repos = c('https://paulesantos.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/paulesantos/wcvpmatch/issues

Pkgdown/docs site:https://paulesantos.github.io

Datasets:
  • fia - Cleaned Master Tree Species List from FIA

On CRAN:

Conda:

plantwcvp

5.56 score 4 stars 15 scripts 132 downloads 5 exports 26 dependencies

Last updated from:af05f46560. Checks:9 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-develOK232
source / vignettesOK278
linux-releaseOK201
macos-releaseOK101
macos-oldrelOK116
windows-develOK122
windows-releaseOK135
windows-oldrelOK127
wasm-releaseOK147

Exports:classify_spnameswcvp_distributionwcvp_matchingwcvp_setup_infowcvp_synonyms

Dependencies:assertthatcachemclicpp11dplyrfastmapfozziejoingenericsgluelifecyclemagrittrmemoisepillarpkgconfigpurrrR6rlangstringdiststringistringrtibbletidyrtidyselectutf8vctrswithr

Resolve Names with wcvp_matching()
Example backbone | Parse the input names | Run the matching pipeline | Read the pathway flags | Accepted-name resolution | Duplicate handling | Practical notes
Rendered fromwcvp-matching.Rmdusingknitr::rmarkdown

Last update: 2026-08-09
Started: 2026-03-28

Retrieve Distribution with wcvp_distribution()
Example backbone | Species-level retrieval | One row per submitted name | Compact table for a spatial join | Genus-level retrieval | Family-level retrieval | Fallback from species to genus | Practical notes
Rendered fromwcvp-distribution.Rmdusingknitr::rmarkdown

Last update: 2026-08-09
Started: 2026-03-28