CV

Curriculum vitae, research experience, and academic activities.

Contact Information

Name Joshua Faskowitz
Email faskowitzji@nih.gov

Experience

  • 2022 -

    Bethesda, MD

    Postdoctoral Fellow, Section on Functional Imaging Methods
    National Institute of Mental Health
    PI: Dr. Peter Bandettini
    • Develop and apply methods for characterizing fMRI correlation structure across space and time.
    • Study how preprocessing, physiology, and signal interpretation shape inferences about functional brain organization.
  • 2021 - 2022

    Bloomington, IN

    Postdoctoral Researcher
    IU Department of Psychological and Brain Sciences
    PIs: Dr. Olaf Sporns and Dr. Richard Betzel
    • Extended edge-centric and community-based network models for studies of human brain organization.
    • Supported collaborative neuroimaging and network science projects through analysis, mentoring, and shared computational workflows.
  • 2016 - 2021

    Bloomington, IN

    Graduate Student
    IU Computational Cognitive Neuroscience Lab
    PI: Dr. Olaf Sporns
    • Investigated mesoscale organization, edge-centric representations, and time-varying structure in structural and functional brain networks.
    • Collaborated across labs on methods, data sharing, and reproducible computational analyses in network neuroscience.
  • 2014 - 2016

    Los Angeles, CA

    Project Assistant
    USC Imaging Genetics Center
    PI: Dr. Paul Thompson; under supervision of Dr. Neda Jahanshad
    • Processed MRI data into analysis-ready neuroimages by designing reproducible workflows.
  • 2012 - 2014

    Los Angeles, CA

    Undergraduate Research Assistant
    USC Emotion and Cognition Lab
    PI: Dr. Mara Mather; under supervision of Dr. Allison Ponzio
    • Administered experiments over five semesters and one summer, totaling more than 800 lab hours.

Education

  • 2016 - 2021

    Bloomington, IN

    PhD
    Indiana University Bloomington
    Neuroscience and Psychology
    • Advisor: Dr. Olaf Sporns
    • Committee: Dr. Olaf Sporns, Dr. Aina Puce, Dr. Amanda Mejia, and Dr. Richard Betzel
  • 2010 - 2014

    Los Angeles, CA

    BA
    University of Southern California
    Neuroscience and Cognitive Science

Research Areas

Focus: Network neuroscience; network science algorithms and applications; community detection; edge-centric modeling; fMRI analysis and interpretation; time-varying connectivity

Honors and Awards

  • 2023

    Departmental award for an outstanding recent PhD graduate.

  • 2021

    One of four awardees selected from regional neuroscience programs at Indiana University, IUPUI, Purdue, and Notre Dame.

  • 2021

    Departmental award for an outstanding advanced graduate student, shared with another student.

  • 2020

    Fellowship support totaling $20,000.

  • 2016, 2019

    Travel award of approximately $300.

  • 2019

    Travel award of $800.

  • 2016

    NSF GRFP support at $34,000 per year for three years.

  • 2016

    Fellowship award of $4,000.

  • 2010

    Full-tuition scholarship awarded for academics, leadership, and community service.

  • 2014

    Award for academic and leadership excellence; one of 112 undergraduate awardees.

  • 2014

    Recognition for excelling in widely separated fields of study and for conducting scholarly research.

Invited Talks

Network Outcomes, Uses, and Null Models: Spring 2022; Practical Applications of Network Neuroscience Workshop; co-organized with Dr. Jenya Chumin
Brain Networks: Close to the Edge: Spring 2022; Washington University in St. Louis, Neuroimaging in Health and Disease Seminar Series
Brain Networks: Close to the Edge: Spring 2022; Dr. Lucina Uddin Lab Meeting
fMRI Preprocessing Workshop: Summer 2022; Indiana University; three-day workshop covering workflows for processing functional neuroimaging data on IU high-performance computing resources
Publicly Available Neuroimaging Databases: Spring 2020; CUNY 2020 Workshop on Remote Data Collection

Teaching

The Consciousness Network: Summer 2023 and Summer 2024; NIH summer journal club; co-organized with Dr. Sharif Kronemer
P303: Health Psychology: Spring 2019; Indiana University; teaching assistant
P211: Methods of Experimental Psychology: Fall 2018; Indiana University; instructor of record

Workshops and Hackathons

NIMH Grant Writing Workshop: 2024 and 2025; National Institute of Mental Health; full-day overview of grantsmanship
Brainhack-Networks: May 2019; University of Vermont; pre-NetSci 2019 workshop
Brainhack Global at IU: Spring 2018; Indiana University
5th Indiana Neuroimaging Symposium and Hackathon: Fall 2017; Purdue University
Neurohackweek: Fall 2017; University of Washington eScience Institute
4th Indiana Neuroimaging Symposium and Hackathon: Fall 2016; Indiana University
OHBM Hackathon: June 2015; Honolulu, USA; pre-OHBM 2015 workshop

Open Science

Multi Atlas Transfer Tools: Fit parcellations using FreeSurfer and distributed as a Brainlife.io application; run more than 19,000 times as a Brainlife.io app
fMRI-2-Mat Tools: Tools for nuisance regression and matrix-based downstream analysis of fMRI data
Lifespan structural connectivity matrices from Faskowitz (2018): Shared dataset released for downstream reuse
Brain networks across the web: Curated collection of openly available brain-network datasets

Skills

Coding and scripting (Advanced): MATLAB, Bash, Awk, Grep, Sed, Python, R, LaTeX
Computational tools (Advanced): GitHub, HPC environments, Docker, Singularity, Unix
Neuroimaging packages (Advanced): FSL, FreeSurfer, ANTs, Dipy, fMRIPrep, MRtrix, AFNI

Professional Service

Journal peer review: Aperture Neuro; Brain Imaging and Behavior; Brain Structure and Function; Biological Psychiatry; Cerebral Cortex; Communications Biology; Human Brain Mapping; Nature Communications; Network Science; Network Neuroscience; NeuroImage; Scientific Data; Scientific Reports; The Journal of Neuroscience; Trends in Cognitive Sciences

Professional Affiliations

  • Network Science Society
  • Organization for Human Brain Mapping
  • Society for Neuroscience

Scholarly Contributions

Publications: For a list of articles, visit my Google Scholar or the publications page.