broad-malaria-firecloud

Workflow description language (WDL) workflows for scalable, genomic analyses employed by the Malaria Group, Infectious Disease and Microbiome Program at the Broad Institute. See my talk on the topic here.

usage notes

These are intended for use on FireCloud (now Terra), but can also be adapted for/ executed on a cluster or local machine using Cromwell.

See here for more information on how to access and use FireCloud. See here for more information on Cromwell.