Overview

A modest set of dev container Features features useful for authoring and testing Nextflow pipelines

This repository contains a collection of two Features - nextflow and nf-test. Each sub-section below shows a sample devcontainer.json alongside example usage of the Feature. At present, there are no options available for the nextflow feature, so the empty object is provided after the feature ID:

`nextflow`

Installs Nextflow and prerequisites (Java)

$ nextflow -version
      N E X T F L O W
      version 22.10.4 build 5836
      created 09-12-2022 09:58 UTC (04:58 EDT)
      cite doi:10.1038/nbt.3820
      http://nextflow.io

`nf-test`

Installs nf-test

$ nf-test version
🚀 nf-test 0.7.1
https://code.askimed.com/nf-test
(c) 2021 - 2022 Lukas Forer and Sebastian Schoenherr
Nextflow Runtime:
      N E X T F L O W
      version 22.10.4 build 5836
      created 09-12-2022 09:58 UTC (04:58 EDT)
      cite doi:10.1038/nbt.3820
      http://nextflow.io