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  1. Plot read coverage from BAM files over genomic regions, backend in rust (under 4s, 12 bam files over 2.2MB!). Built with RNA-seq in mind but compatible with any aligned data in BAM format.

    Python 6

  2. A Rust librairy to parse Cigar string and in particular identify junction position.

    Rust 1

  3. determine the strand of origin of a sequencing fragment based on the librairy layout.

    Rust 1

  4. A lightweight functional Python library for efficient FASTA file parsing and DNA sequence manipulation. No OOP bloat, data only data.

    Python 1 1

  5. a dependancy free gtf parser in python.

    Python 1

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