Devon Ryan dpryan79

• Genedata AG

• Basel, Switzerland / Freiburg, Germany

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1. Tools to process and analyze deep sequencing data.

   Python 763 221

2. This repository contains chromosome/contig name mappings between UCSC <-> Ensembl <-> Gencode for a variety of genomes.

   247 60

3. A python extension for quick access to bigWig and bigBed files

   C 250 56

4. A C library for handling bigWig files

   C 83 27

5. A (mostly) universal methylation extractor for BS-seq experiments.

   C 181 49

6. Bisulfite alignment on nodes of a cluster

   C 9 2