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Merged

Merged

* Neutral POV for install instructions (#12603)
* Neutral POV for install instructions
* Update README.md
Co-authored-by: Moritz Schreiber <68053396+mosc9575@users.noreply.github.com>
Co-authored-by: Moritz Schreiber <68053396+mosc9575@users.noreply.github.com>
* Fix export with fractional CSS lengths (#12613)
* Fix layout propagation in nested mixed layouts (#12612)
* Replace flake8 with ruff (#12605)
* apply fixes
* stricter, more fixes
* more fixes, check __init__.py better
* remove flake8
* add U amd W checks
* combine imports
* remove spurious # noqa
* Remove LGTM (#12620)
LGTM service will shut down in a few weeks.
https://github.blog/2022-08-15-the-next-step-for-lgtm-com-github-code-scanning/#end-of-november-new-commits-and-pull-requests-are-no-longer-analyzed
* Added metadata to glyphs.py, multi_legend.py, multi_scale.py (#12547)
* Added metadata to glyphs.py, multi_legend.py, multi_scale.py
* Removed trailing whitespaces.
* Pared down apis to the most interesting and put it in a single line.
* Added the apis in a single line and updated the keywords.
* Bv/deprecated apis in tests (#12622)
* pydot -> pygraphviz
* remove publish_display_data source param
* Exlude tmp files from coverage (#12629)
* exlude tmp files from coverage
* silence linter
* Update CodeQL action (#12630)
* Update CodeQL action
* kick the tires
* Fix application of UI element styles in Firefox (#12634)
* Add CodeQL config (#12636)
* codeql config in proper job
* Updates to Docker image building and testing (#12351)
* Updates to docker image building
* Support all non-firefox tests in docker container
* Try ECR upload
* Update ECR region and repository
* Chromedriver version does not have to match chrome version
* Try ECR upload
* Try adding custom registry alias
* try default registry alias
* Try default alias take 2
* specify public registry login
* fix registry type config
* Try dockerhub
* fix typo
* Try multiple tags
* Option to push or save image
* Github action to run tests in docker container
* Temporarily force BokehJS-CI to run
* Try to get docker testing to run in CI
* Run docker in CI using wheel
* Use entrypoint script to install from wheel
* Final tweaks
* Switch to docker testing using image named branch-3.1
* Add test running chromium in Docker without required envvar
* Move test-in-docker to separate workflow
* Better docker CI names
Co-authored-by: Bryan Van de Ven <bryan@bokeh.org>
* Disable docker from wheel integration tests (#12639)
* Added find_stack_level to util.warnings (#12650)
* Added find_stack_level to util.deprecation
* Moving deprecation -> warnings
* Change to use internal warn
* Fix import
* Fix lint
* Fix failing test
* Resolve issues with code quality checks (#12654)
* Use type[T] instead of Type[T] where permitted
* Pin ruff to last working version (0.0.144)
* Compute layout for initially undisplayed components (#12653)
* Fix broken bokeh-tree links (#12644)
* fix broken bokeh-tree links
* fix broken metadata ref
* more versioned links
* lint
* CodeQL: remove import linter hack (#12645)
* remove API import lint hack in properties.py
* remove API import lint hack in plotting/__init__.py
* remove API import lint hack in sampledata/__init__.py
* remove API import lint hack in document/__init__.py
* remove API import lint hack in embed/util.py
* remove API import lint hack in top level __init__.py
* remove API import lint hack in model/util.py
* clean up doc event imports
* clean up defaults tests imports
* remove non-functional spec.py
* review changes
* Add default styles to FILE template (#12656)
* Add default styles to FILE template
* Don't ignore template files
* Skip stocks and surface3d examples
* Adapt Bokeh logo for dark theme and add docs badge in README.md (#12659)
Co-authored-by: Moritz Schreiber <68053396+mosc9575@users.noreply.github.com>
Co-authored-by: Mateusz Paprocki <mattpap@gmail.com>
Co-authored-by: Yash Pratapwar <65851650+Yash-Pratapwar@users.noreply.github.com>
Co-authored-by: Ian Thomas <ianthomas23@gmail.com>
Co-authored-by: Simon Høxbro Hansen <simon.hansen@me.com>
Co-authored-by: Pavithra Eswaramoorthy <pavithraes@outlook.com>

* apply fixes
* stricter, more fixes
* more fixes, check __init__.py better
* remove flake8
* add U amd W checks
* combine imports