This repository is the replication package of "Out of Sight, Out of Mind: Better Automatic Vulnerability Repair by Broadening Input Ranges and Sources".

Resources

• In the replication, we provide:
  • the scripts we used to:
    • 0a_train.sh: fine-tune the models with validation.
    • 0b_test.sh: perform inference using the fine-tuned models.
  • the source code we used to:
    • train_model.py: the main code for training/validating.
    • test_model.py: the main code for testing.
    • src/: the utils, model, data preprocessing, etc. for FiD.
  • the CWE knowledge we collected from CWE website:
    • CWE_examples_GPT35_generate_fixes_full.csv: the raw vulnerable code examples and their analysis and CWE names directly collected from CWE homepages.
    • chatgpt_api_generate_fix.py: the main code for generating fixes for vulnerable code examples with expert analysis as guidance.
    • ChatGPT_generated_fixes_labels.xlsx: the manually labeled correctness for generated fixes for vulnerable code examples.

We stored the datasets you need in order to replicate our experiments at: https://zenodo.org/records/10150013 and Here is CodeT5 model after adaptation.

• requirements.txt contains the dependencies needed.

• The experiments were conducted on a server equipped with NVIDIA L40 GPU and Intel(R) Xeon(R) CPU E5-2420 v2@ 2.20GHz, running the Ubuntu OS.

• If you meet OutOfMemoryError: please note that you typically need around 30 GB GPU memory to run VulMaster.

Install dependencies

To install dependencies in once, run:

./setup.sh

Then, install conda env and dependencies:

conda create -n vulmaster python=3.9
conda activate vulmaster
pip install -r requirements.txt

Train and Test

To replicate VulMaster, ensure that c_dataset/ is in the root path of this project.

Training:

./0a_train.sh 

Testing:

./0b_test.sh

Evaluation

To evaluate ExtractFix, look readme in benchmarks for details.

Example of input json file

[
  {
    "questions": "CWE-(ID) Code Input Vulnerable Code Is: CWE-(ID) (vulnerable function with <vul-start> and <vul-end>)",
    "answers": [
      "CWE-(ID) Fixed Code Lines are: <vul-start> (fixed code by developer) [<vul-end>]"  // If <vul-end> not exist, it will insert fixed code before original <vul-start>
    ],
    "ctxs": [
      {
        "id": "0",
        "title": "CWE-(ID) Code Input Vulnerable Code Is: CWE-(ID) (vulnerable function with <vul-start> and <vul-end>)",
        "text": "CWE-(ID) Fixed Code Lines are:"
      },
      {
        "id": "X02/X03/...", // X is the number of the subject e.g. 2/3/,..., 102/103/...
        "title": "CWE-(ID) Code Input AST Vulnerable Code Is: (AST segments of patch location in vulnerable function)",
        "text": "CWE-(ID) Fixed Code Lines are:"
      },
      {
        "id": "10000/10001/10002/...",
        "title": "CWE-(ID) Vulnerable Code Is: CWE-(ID) (CWE example: vulnerable code with <vul-start> and <vul-end>)",
        "text": "CWE-(ID) Fixed Code Lines are: <vul-start> (CWE example: fixed code by developer) [<vul-end>]"
      },
      {
        "id": "40000",
        "title": "CWE-(ID) Name: (CWE name)\tDescription: (CWE description)\tRelated Weakness: (CWE related weakness)\tObserved Examples: (CWE examples with link)",
        "text": "CWE-(ID) Fixed Code Lines are:"
      }
    ]
  }
]

Generate fixes for CWE vulnerable code examples via ChatGPT

python chatgpt_api_generate_fix.py