r/ImageJ Help

Jeffrey N. Muprhy @MurphysLab

Code to answer questions & assist folks on the ImageJ subreddit, r/ImageJ.

Some are simply demo files.

• images_in_two_folders.ijm -- code to help processing two sets of images in separate folders, such as where one is used to generate an ROI, which is then applied to an image in the other folder. See this question.
• mark_angles.ijm -- automatically mark angles. See this question. See this question.
• finding_a_substring_in_image_info.ijm -- Find a specific substring within the output of getImageInfo().
• spinning_patterns.ijm -- Rotate a sinusoidal pattern. See this question.
• itemize_stack_particles.ijm -- used to apply a consistent set of item labels to particles in an image stack, in order to enable tracking. See this question.